期刊论文详细信息
BMC Microbiology
Molecular epidemiology and characterization of an outbreak causing Klebsiella pneumoniae clone carrying chromosomally located bla CTX-M-15 at a German University-Hospital
Can Imirzalioglu2  Trinad Chakraborty2  Torsten Hain2  Eugen Domann2  Linda Falgenhauer2  Moritz Fritzenwanker2  Stephen E. Mshana1 
[1] Catholic University of Health and Allied Sciences, Weill Bugando School of Medicine Box, Mwanza, 1464, Tanzania;German Center for Infection Research (DZIF), Partner site Giessen-Marburg-Langen, Campus Giessen, Schubertstrasse 81, Giessen, 35392, Germany
关键词: Chromosomal insertion;    Klebsiella;    Multi-resistance;    ESBL;    Nosocomial infection;    Hospital;   
Others  :  1221664
DOI  :  10.1186/s12866-015-0460-2
 received in 2015-01-15, accepted in 2015-06-01,  发布年份 2015
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【 摘 要 】

Background

Multi-drug resistant Klebsiella pneumoniae strains are a common cause of health care associated infections worldwide. Clonal spread of Klebsiella pneumoniae isolates carrying plasmid mediated CTX-M-15 have been commonly reported. Limited data is available regarding dissemination of chromosomally encoded CTX-M-15 in Klebsiella pneumoniae worldwide.

Results

We examined 23 non-repetitive ESBL-producing Klebsiella pneumoniae strains isolated from clinical specimens over a period of 4 months in a German University Hospital. All isolates were characterized to determine their genetic relatedness using Pulsed-Field Gel Electrophoresis (PFGE) and Multi Locus Sequence Typing (MLST). PFGE revealed three clusters (B1, B2, and B3) with a sub-cluster (A3) comprising of 10 isolates with an identical PFGE pattern. All strains of the cluster B3 with similar PFGE patterns were typed as ST101, indicating an outbreak situation. The ESBL allele blaCTX-M-15 was identified in 16 (69.6 %) of all isolates, including all of the outbreak strains. Within the A3 sub-cluster, the CTX-M-15 allele could not be transferred by conjugation. DNA hybridization studies suggested a chromosomal location of blaCTX-M-15. Whole genome sequencing located CTX-M-15 within a complete ISEcp-1 transposition unit inserted into an ORF encoding for a putative membrane protein. PCR-based analysis of the flanking regions demonstrated that insertion into this region is unique and present in all outbreak isolates.

Conclusion

This is the first characterization of a chromosomal insertion of blaCTX-M-15 in Klebsiella pneumonia ST101, a finding suggesting that in Enterobacteriaceae, chromosomal locations may also act as reservoirs for the spread of blaCTX-M-15 encoding transposition units.

【 授权许可】

   
2015 Mshana et al.

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【 参考文献 】
  • [1]Peirano G, Sang JHK, Pitondo-Silva A, Laupland KB, Pitout JD. Molecular epidemiology of extended-spectrum-β-lactamase-producing Klebsiella pneumoniae over a 10 year period in Calgary, Canada. J Antimicrob Chemother. 2012; 67:1114-20.
  • [2]Romero L, Lopez L, Rodríguez‐Baño J, Ramón Hernández J, Martínez‐Martínez L, Pascual A. Long‐term study of the frequency of Escherichia coli and Klebsiella pneumoniae isolates producing extended‐spectrum β‐lactamases. Clin Microbiol Infect. 2005; 11:625-31.
  • [3]Mshana SE, Hain T, Domann E, Lyamuya EF, Chakraborty T, Imirzalioglu C. Predominance of Klebsiella pneumoniae ST14 carrying CTX-M-15 causing neonatal sepsis in Tanzania. BMC Infect Dis. 2013; 13:466. BioMed Central Full Text
  • [4]Barguigua A, El Otmani F, Talmi M, Bourjilat F, Haouzane F, Zerouali K et al.. Characterization of extended-spectrum β-lactamase-producing Escherichia coli and Klebsiella pneumoniae isolates from the community in Morocco. J Med Microbiol. 2011; 60:1344-52.
  • [5]Poirel L, Bonnin RA, Nordmann P. Genetic support and diversity of acquired extended-spectrum β-lactamases in Gram-negative rods. Infect Genet Evol. 2012; 12:883-93.
  • [6]Younes A, Hamouda A, Dave J, Amyes S. Prevalence of transferable blaCTX-M-15 from hospital-and community-acquired Klebsiella pneumoniae isolates in Scotland. J Antimicrob Chemother. 2011; 66:313-8.
  • [7]Coelho A, Mirelis B, Alonso-Tarrés C, Larrosa MN, Miró E, Abad RC et al.. Detection of three stable genetic clones of CTX-M-15-producing Klebsiella pneumoniae in the Barcelona metropolitan area, Spain. J Antimicrob Chemother. 2009; 64:862-4.
  • [8]Coelho A, González-López JJ, Miró E, Alonso-Tarrés C, Mirelis B, Larrosa MN et al.. Characterisation of the CTX-M-15-encoding gene in Klebsiella pneumoniae strains from the Barcelona metropolitan area: plasmid diversity and chromosomal integration. Int J Antimicrob Agents. 2010; 36:73-8.
  • [9]Fabre L, Delauné A, Espié E, Nygard K, Pardos M, Polomack L et al.. Chromosomal integration of the extended-spectrum β-lactamase gene blaCTX-M-15 in Salmonella enterica serotype Concord isolates from internationally adopted children. Antimicrob Agents Chemother. 2009; 53:1808-16.
  • [10]Song W, Kim J, Bae IK, Jeong SH, Seo YH, Shin JH et al.. Chromosome-encoded AmpC and CTX-M extended-spectrum β-lactamases in clinical isolates of Proteus mirabilis from Korea. Antimicrob Agents Chemother. 2011; 55:1414-9.
  • [11]Mshana SE, Imirzalioglu C, Hossain H, Hain T, Domann E, Chakraborty T. Conjugative IncFI plasmids carrying CTX-M-15 among Escherichia coli ESBL producing isolates at a University hospital in Germany. BMC Infect Dis. 2009; 9:97. BioMed Central Full Text
  • [12]Baraniak A, Fiett J, Hryniewicz W, Nordmann P, Gniadkowski M. Ceftazidime-hydrolysing CTX-M-15 extended-spectrum β-lactamase (ESBL) in Poland. J Antimicrob Chemother. 2002; 50:393-6.
  • [13]Hunter PR, Fraser C. Application of a numerical index of discriminatory power to a comparison of four physiochemical typing methods for Candida albicans. J Clin Microbiol. 1989; 27:2156-60.
  • [14]Hunter PR, Gaston MA. Numerical index of the discriminatory ability of typing systems: an application of Simpson’s index of diversity. J Clin Microbiol. 1988; 26:2465-6.
  • [15]Brisse S, Van Himbergen T, Kusters K, Verhoef J. Development of a rapid identification method for Klebsiella pneumoniae phylogenetic groups and analysis of 420 clinical isolates. Clin Microbiol Infect. 2004; 10:942-5.
  • [16]Carattoli A, Miriagou V, Bertini A, Loli A, Colinon C, Villa L et al.. Replicon typing of plasmids encoding resistance to newer β-lactams. Emerg Infect Dis. 2006; 12:1145.
  • [17]Diancourt L, Passet V, Verhoef J, Grimont PA, Brisse S. Multilocus sequence typing of Klebsiella pneumoniae nosocomial isolates. J Clin Microbiol. 2005; 43:4178-82.
  • [18]Schmitt J, Jacobs E, Schmidt H. Molecular characterization of extended-spectrum beta-lactamases in Enterobacteriaceae from patients of two hospitals in Saxony, Germany. J Med Microbiol. 2007; 56:241-9.
  • [19]Barton BM, Harding GP, Zuccarelli AJ. A general method for detecting and sizing large plasmids. Anal Biochem. 1995; 226:235-40.
  • [20]Chevreux B, Pfisterer T, Drescher B, Driesel AJ, Müller WE, Wetter T et al.. Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs. Genome Res. 2004; 14:1147-59.
  • [21]Partridge SR. Analysis of antibiotic resistance regions in Gram‐negative bacteria. FEMS Microbiol Rev. 2011; 35:820-55.
  • [22]Potron A, Poirel L, Rondinaud E, Nordmann P. Intercontinental spread of OXA-48 beta-lactamase-producing Enterobacteriaceae over a 11-year period, 2001 to 2011. Euro Surveill. 2013; 18:1-13.
  • [23]Seki LM, Pereira PS, de Souza Mda P, Conceição MS, Marques EA, Porto CO et al.. Molecular epidemiology of KPC-2-producing Klebsiella pneumoniae isolates in Brazil: the predominance of sequence type 437. Diagn Microbiol Infect Dis. 2011; 70:274-7.
  • [24]Leavitt A, Carmeli Y, Chmelnitsky I, Goren MG, Ofek I, Navon-Venezia S. Molecular epidemiology, sequence types, and plasmid analyses of KPC-producing Klebsiella pneumoniae strains in Israel. Antimicrob Agents Chemother. 2010; 54:3002-6.
  • [25]Li B, Yi Y, Wang Q, Woo PC, Tan L, Jing H et al.. Analysis of drug resistance determinants in Klebsiella pneumoniae isolates from a tertiary-care hospital in Beijing, China. PloS One. 2012; 7(7):e42280.
  • [26]Boyd DA, Tyler S, Christianson S, McGeer A, Muller MP, Willey BM et al.. Complete nucleotide sequence of a 92-kilobase plasmid harboring the CTX-M-15 extended-spectrum beta-lactamase involved in an outbreak in long-term-care facilities in Toronto, Canada. Antimicrob Agents Chemother. 2004; 48:3758-64.
  • [27]Rodríguez MM, Power P, Radice M, Vay C, Famiglietti A, Galleni M et al.. Chromosome-encoded CTX-M-3 from Kluyvera ascorbata: a possible origin of plasmid-borne CTX-M-1-derived cefotaximases. Antimicrob Agents Chemother. 2004; 48:4895-7.
  • [28]Hudson CM, Bent ZW, Meagher RJ, Williams KP. Resistance Determinants and Mobile Genetic Elements of an NDM-1-Encoding Klebsiella pneumoniae Strain. PLoS One. 2014; 9:e99209.
  • [29]Andersen PS, Stegger M, Aziz M, Contente-Cuomo T, Gibbons HS, Keim P et al.. Complete genome sequence of the epidemic and highly virulent CTX-M-15-producing H30-Rx subclone of Escherichia coli ST131. Genome Announc. 2013; 1:e00988-00913.
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