BMC Biotechnology | |
Enzymatic activity of a subtilisin homolog, Tk-SP, from Thermococcus kodakarensis in detergents and its ability to degrade the abnormal prion protein | |
Azumi Hirata3  Yuki Hori3  Yuichi Koga2  Jun Okada3  Akikazu Sakudo1  Kazuyoshi Ikuta4  Shigenori Kanaya2  Kazufumi Takano3  | |
[1] Faculty of Medicine, University of the Ryukyus, Nishihara, Japan | |
[2] Department of Material and Life Science, Graduate School of Engineering, Osaka University, Suita, Japan | |
[3] Laboratory of Biological Chemistry, Department of Biomolecular Chemistry, Kyoto Prefectural University, Kyoto, Japan | |
[4] Department of Virology, Center for Infectious Disease Control, Research Institute for Microbial Diseases, Osaka University, Suita, Japan | |
关键词: Decontamination; Degradation; Transmissible spongiform encephalopathies (TSE); Prion; Detergent compatibility; Subtilisin; Hyperthermophilic archaeon; Serine protease; | |
Others : 1123231 DOI : 10.1186/1472-6750-13-19 |
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received in 2012-11-19, accepted in 2013-02-26, 发布年份 2013 | |
【 摘 要 】
Background
Tk-SP is a member of subtilisin-like serine proteases from a hyperthermophilic archaeon Thermococcus kodakarensis. It has been known that the hyper-stable protease, Tk-SP, could exhibit enzymatic activity even at high temperature and in the presence of chemical denaturants. In this work, the enzymatic activity of Tk-SP was measured in the presence of detergents and EDTA. In addition, we focused to demonstrate that Tk-SP could degrade the abnormal prion protein (PrPSc), a protease-resistant isoform of normal prion protein (PrPC).
Results
Tk-SP was observed to maintain its proteolytic activity with nonionic surfactants and EDTA at 80°C. We optimized the condition in which Tk-SP functions efficiently, and demonstrated that the enzyme is highly stable in the presence of 0.05% (w/v) nonionic surfactants and 0.01% (w/v) EDTA, retaining up to 80% of its activity. Additionally, we also found that Tk-SP can degrade PrPSc to a level undetectable by western-blot analysis.
Conclusions
Our results indicate that Tk-SP has a great potential for technological applications, such as thermo-stable detergent additives. In addition, it is also suggested that Tk-SP-containing detergents can be developed to decrease the secondary infection risks of transmissible spongiform encephalopathies (TSE).
【 授权许可】
2013 Hirata et al; licensee BioMed Central Ltd.
【 预 览 】
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20150216021010308.pdf | 624KB | download | |
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Figure 2. | 28KB | Image | download |
Figure 1. | 23KB | Image | download |
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【 参考文献 】
- [1]Zhu D, Wu Q, Wang N: Industrial enzymes. In Comprehensive Biotechnology. Volume 3. 2nd edition. Edited by Muray M-Y. Waltham: Elsevier; 2011:3-13.
- [2]Bryan PN: Protein engineering of subtilisin. Biochim Biophys Acta 2000, 1543:203-222.
- [3]Ward OP: Proteases. In Comprehensive Biotechnology. Volume 3. 2nd edition. Edited by Muray M-Y. Waltham: Elsevier; 2011:571-582.
- [4]Kirk O, Borchert TV, Fuglsang CC: Industrial enzyme applications. Curr Opin Biotechnol 2002, 13:345-351.
- [5]Gessesse A, Hatti-Kaul R, Gashe BA, Mattiasson B: Novel alkaline proteases from alkaliphilic bacteria grown on chicken feather. Enzyme Microb Technol 2003, 32:519-524.
- [6]Sellami-Kamoun A, Haddar A, Ali NE, Ghorbel-Frikha B, Kanoun S, Nasri M: Stability of thermostable alkaline protease from Bacillus licheniformis RP1 in commercial solid laundry detergent formulations. Microbiol Res 2008, 163:299-306.
- [7]Mcleod AH, Murdoch H, Dickinson J, Dennis MJ, Hall GA, Buswell CM, Carr J, Taylor DM, Sutton JM, Raven NDH: Proteolytic inactivation of the bovine spongiform encephalopathy agent. Biochem Biophys Res Commun 2004, 317:1165-1170.
- [8]Dickinson J, Murdoch H, Dennis MJ, Hall GA, Bott R, Crabb WD, Penet C, Sutton JM, Raven NDH: Decontamination of prion protein (BSE301V) using a genetically engineered protease. J Hosp Infect 2009, 72:65-70.
- [9]Langeveld JPM, Wang JJ, Van de Wiel DFM, Shih GC, Garssen GJ, Bossers A, Shih JCH: Enzymatic degradation of prion protein in brain stem from infected cattle and sheep. J Infect Dis 2003, 188:1782-1789.
- [10]Prusiner SB: Prions. Proc Natl Acad Sci USA 1998, 95:13363-13383.
- [11]Wissmann C: The state of the prion. Nat Rev Microbiol 2004, 2:861-871.
- [12]Collinge J: Prion diseases of humans and animals: Their causes and molecular basis. Annu Rev Neurosci 2001, 24:519-550.
- [13]WHO Infection Control Guidelines for Transmissible Spongiform Encephalopathies. http://www.who.int/csr/resources/publications/bse/whocdscsraph2003.pdf webcite
- [14]Peretz D, Supattapone S, Giles K, Vergara J, Freyman Y, Lessard P, Safar JG, Glidden DV, McCulloch C, Nguyen HOB, Scott M, DeArmond SJ, Prusiner SB: Inactivation of prions by acidic sodium dodecyl sulfate. J Virol 2006, 80:322-331.
- [15]Atomi H, Fukui T, Kanai T, Morikawa M, Imanaka T: Description of Thermococcus kodakaraensis sp. nov., a well studied hyperthermophilic archaeon previously reported as Pyrococcus sp. KOD1. Archaea 2004, 1:263-267.
- [16]Pulido M, Saito K, Tanaka S, Koga Y, Morikawa M, Takano K, Kanaya S: Ca2+-dependent maturation of subtilisin from a hyperthermophilic archaeon, Thermococcus kodakaraensis: the propeptide is a potent inhibitor of the mature domain but is not required for its folding. Appl Environ Microbiol 2006, 72:4154-4162.
- [17]Foophow T, Tanaka S, Koga Y, Takano K, Kanaya S: Subtilisin-like serine protease from hyperthermophilic archaeon Thermococcus kodakaraensis with N- and C-terminal propeptides. Protein Eng Des Sel 2010, 23:347-355.
- [18]Tanaka S, Saito K, Chon H, Matsumura H, Koga Y, Takano K, Kanaya S: Crystal structure of unautoprocessed precursor of subtilisin from a hyperthermophilic archaeon. J Biol Chem 2007, 282:8246-8255.
- [19]Tanaka S, Matsumura H, Koga Y, Takano K, Kanaya S: Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: Insight into structural changes during maturation. J Mol Biol 2007, 372:1055-1069.
- [20]Pulido MA, Koga Y, Takano K, Kanaya S: Directed evolution of Tk-subtilisin from a hyperthermophilic archaeon: identification of a single amino acid substitution responsible for low-temperature adaptation. Protein Eng Des Sel 2007, 20:143-153.
- [21]Pulido MA, Tanaka S, Sringiew C, You DJ, Matsumura H, Koga Y, Takano K, Kanaya S: Requirement of left-handed Glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses. J Mol Biol 2007, 374:1359-1373.
- [22]Tanaka S, Takeuchi Y, Matsumura H, Koga Y, Takano K, Kanaya S: Crystal structure of Tk-subtilisin folded without propeptide: Requirement of propeptide for acceleration of folding. FEBS Lett 2008, 582:3875-3878.
- [23]Tanaka S, Matsumura H, Koga Y, Takano K, Kanaya S: Identification of the interactions critical for propeptide-catalyzed folding of Tk-Subtilisin. J Mol Biol 2009, 394:306-319.
- [24]Foophow T, Tanaka S, Angkawidjaja C, Koga Y, Takano K, Kanaya S: Crystal structure of a subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis: Requirement of a C-terminal β-jelly roll domain for hyperstability. J Mol Biol 2010, 400:865-877.
- [25]Sinsereekul N, Foophow T, Yamanouchi M, Koga Y, Takano K, Kanaya S: An alternative mature form of subtilisin homologue, Tk-SP, from Thermococcus kodakaraensis identified in the presence of Ca2+. FEBS Lett 2011, 278:1901-1911.
- [26]Kannan Y, Koga Y, Inoue Y, Haruki M, Takagi M, Imanaka T, Morikawa M, Kanaya S: Active subtilisin-like protease from a hyperthermophilic archaeon in a form with a putative prosequence. Appl Environ Microbiol 2001, 67:2445-2452.
- [27]Tanaka S, Saito K, Chon H, Matsumura H, Koga Y, Takano K, Kanaya S: Crystallization and preliminary X-ray diffraction study of an active-site mutant of pro-Tk-Subtilisin from a hyperthermophilic archaeon. Acta Crystallogr Sect F 2006, 62:902-905.
- [28]Gupta R, Beg QK, Lorenz P: Bacterial alkaline proteases: molecular approaches and industrial applications. Appl Microbiol Biotechnol 2002, 59:15-32.
- [29]Kumar CG, Takagi H: Microbial alkaline proteases: from a bioindustrial viewpoint. Biotechnol Adv 1999, 17:561-594.
- [30]Joo HS, Kumar CG, Park GC, Paik SR, Chang CS: Bleach-resistant alkaline protease produced by a Bacillus sp. Isolated from the Korean polychaete, Periserrula leucophryna. Process Biochem 2004, 39:1441-1447.
- [31]Japanese Society of Medical Instrumentation: Guideline for sterility assurance in healthcare setting. Tokyo: Ministry of Health, Labour and Welfare, Japan; 2010.
- [32]Otzen DE: Protein unfolding in detergents: effect of micelle structure, ionic strength, pH, and temperature. Biophys J 2002, 83:2219-2230.