BMC Biotechnology | |
Structural insights from random mutagenesis of Campylobacter jejuni oligosaccharyltransferase PglB | |
Julian Ihssen1  Michael Kowarik2  Luzia Wiesli1  Renate Reiss1  Michael Wacker2  Linda Thöny-Meyer1  | |
[1] Empa, Swiss Federal Laboratories for Materials Science and Technology, Laboratory for Biomaterials, CH-9014, St. Gallen, Switzerland | |
[2] GlycoVaxyn AG, CH-8952, Schlieren, Switzerland | |
关键词: conjugate vaccine; directed evolution; ELISA; screening; random mutagenesis; Campylobacter jejuni; PglB; oligosaccharyltransferase; glycosylation; | |
Others : 1134771 DOI : 10.1186/1472-6750-12-67 |
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received in 2012-06-12, accepted in 2012-09-13, 发布年份 2012 | |
【 摘 要 】
Background
Protein glycosylation is of fundamental importance in many biological systems. The discovery of N-glycosylation in bacteria and the functional expression of the N-oligosaccharyltransferase PglB of Campylobacter jejuni in Escherichia coli enabled the production of engineered glycoproteins and the study of the underlying molecular mechanisms. A particularly promising application for protein glycosylation in recombinant bacteria is the production of potent conjugate vaccines where polysaccharide antigens of pathogenic bacteria are covalently bound to immunogenic carrier proteins.
Results
In this study capsular polysaccharides of the clinically relevant pathogen Staphylococcus aureus serotype 5 (CP5) were expressed in Escherichia coli and linked in vivo to a detoxified version of Pseudomonas aeruginosa exotoxin (EPA). We investigated which amino acids of the periplasmic domain of PglB are crucial for the glycosylation reaction using a newly established 96-well screening system enabling the relative quantification of glycoproteins by enzyme-linked immunosorbent assay. A random mutant library was generated by error-prone PCR and screened for inactivating amino acid substitutions. In addition to 15 inactive variants with amino acid changes within the previously known, strictly conserved WWDYG motif of N-oligosaccharyltransferases, 8 inactivating mutations mapped to a flexible loop in close vicinity of the amide nitrogen atom of the acceptor asparagine as revealed in the crystal structure of the homologous enzyme C. lari PglB. The importance of the conserved loop residue H479 for glycosylation was confirmed by site directed mutagenesis, while a change to alanine of the adjacent, non-conserved L480 had no effect. In addition, we investigated functional requirements in the so-called MIV motif of bacterial N-oligosaccharyltransferases. Amino acid residues I571 and V575, which had been postulated to interact with the acceptor peptide, were subjected to cassette saturation mutagenesis. With the exception of I571C only hydrophobic residues were found in active variants. Variant I571V performed equally well as the wild type, cysteine at the same position reduced glycoprotein yield slightly, while a change to phenylalanine reduced activity by a factor of three.
Conclusions
This study provides novel structure-function relationships for the periplasmic domain of the Campylobacter jejuni N-oligosaccharyltransferase PglB and describes procedures for generating and screening oligosaccharyltransferase mutant libraries in an engineered E. coli system.
【 授权许可】
2012 Ihssen et al.; licensee BioMed Central Ltd.
【 预 览 】
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【 参考文献 】
- [1]Nothaft H, Szymanski CM: Protein glycosylation in bacteria: sweeter than ever. Nat Rev Microbiol 2010, 8(11):765-778.
- [2]Wacker M, Linton D, Hitchen PG, Nita-Lazar M, Haslam SM, North SJ, Panico M, Morris HR, Dell A, Wren BW, et al.: N-linked glycosylation in Campylobacter jejuni and its functional transfer into E. coli. Science 2002, 298(5599):1790-1793.
- [3]Feldman MF, Wacker M, Hernandez M, Hitchen PG, Marolda CL, Kowarik M, Morris HR, Dell A, Valvano MA, Aebi M: Engineering N-linked protein glycosylation with diverse O antigen lipopolysaccharide structures in Escherichia coli. Proc Natl Acad Sci USA 2005, 102(8):3016-3021.
- [4]Ihssen J, Kowarik M, Dilettoso S, Tanner C, Wacker M, Thöny-Meyer L: Production of glycoprotein vaccines in Escherichia coli. Microb Cell Fact 2010, 9:61. BioMed Central Full Text
- [5]Lockhart S: Conjugate vaccines. Expert Rev Vaccines 2003, 2(5):633-648.
- [6]Wacker M, Feldman MF, Callewaert N, Kowarik M, Clarke BR, Pohl NL, Hernandez M, Vines ED, Valvano MA, Whitfield C, et al.: Substrate specificity of bacterial oligosaccharyltransferase suggests a common transfer mechanism for the bacterial and eukaryotic systems. Proc Natl Acad Sci USA 2006, 103(18):7088-7093.
- [7]Li L, Woodward R, Ding Y, Liu XW, Yi W, Bhatt VS, Chen M, Zhang LW, Wang PG: Overexpression and topology of bacterial oligosaccharyltransferase PglB. Biochem Biophys Res Commun 2010, 394(4):1069-1074.
- [8]Maita N, Nyirenda J, Igura M, Kamishikiryo J, Kohda D: Comparative structural biology of eubacterial and archaeal oligosaccharyltransferases. J Biol Chem 2010, 285(7):4941-4950.
- [9]Matsumoto S, Igura M, Nyirenda J, Matsumoto M, Yuzawa S, Noda N, Inagaki F, Kohda D: Crystal structure of the C-terminal globular domain of oligosaccharyltransferase from Archaeoglobus fulgidus at 1.75 A resolution. Biochemistry 2012, 51(20):4157-4166.
- [10]Schwarz F, Lizak C, Fan YY, Fleurkens S, Kowarik M, Aebi M: Relaxed acceptor site specificity of bacterial oligosaccharyltransferase in vivo. Glycobiology 2011, 21(1):45-54.
- [11]Lizak C, Gerber S, Numao S, Aebi M, Locher KP: X-ray structure of a bacterial oligosaccharyltransferase. Nature 2011, 474(7351):350-355.
- [12]Kowarik M, Young NM, Numao S, Schulz BL, Hug I, Callewaert N, Mills DC, Watson DC, Hernandez M, Kelly JF, et al.: Definition of the bacterial N-glycosylation site consensus sequence. EMBO J 2006, 25(9):1957-1966.
- [13]Nita-Lazar M, Wacker M, Schegg B, Amber S, Aebi M: The N-X-S/T consensus sequence is required but not sufficient for bacterial N-linked protein glycosylation. Glycobiology 2005, 15(4):361-367.
- [14]Chen MM, Glover KJ, Imperiali B: From peptide to protein: comparative analysis of the substrate specificity of N-linked glycosylation in C. jejuni. Biochemistry 2007, 46(18):5579-5585.
- [15]Raetz CRH, Whitfield C: Lipopolysaccharide endotoxins. Annu Rev Biochem 2002, 71:635-700.
- [16]Rath A, Glibowicka M, Nadeau VG, Chen G, Deber CM: Detergent binding explains anomalous SDS-PAGE migration of membrane proteins. Proc Natl Acad Sci USA 2009, 106(6):1760-1765.
- [17]Reetz MT, Kahakeaw D, Lohmer R: Addressing the numbers problem in directed evolution. ChemBioChem 2008, 9(11):1797-1804.
- [18]Faridmoayer A, Fentabil MA, Haurat MF, Yi W, Woodward R, Wang PG, Feldman MF: Extreme substrate promiscuity of the Neisseria oligosaccharyl transferase involved in protein O-glycosylation. J Biol Chem 2008, 283(50):34596-34604.
- [19]Jaffee MB, Imperiali B: Exploiting topological constraints to reveal buried sequence motifs in the membrane-bound N-linked oligosaccharyl transferases. Biochemistry 2011, 50(35):7557-7567.
- [20]Igura M, Maita N, Kamishikiryo J, Yamada M, Obita T, Maenaka K, Kohda D: Structure-guided identification of a new catalytic motif of oligosaccharyltransferase. EMBO J 2008, 27(1):234-243.
- [21]Arnold FH, Wintrode PL, Miyazaki K, Gershenson A: How enzymes adapt: lessons from directed evolution. Trends Biochem Sci 2001, 26(2):100-106.
- [22]Stemmer WP: Rapid evolution of a protein in vitro by DNA shuffling. Nature 1994, 370(6488):389-391.
- [23]Reetz MT, Wang LW, Bocola M: Directed evolution of enantioselective enzymes: Iterative cycles of CASTing for probing protein-sequence space. Angew Chem Int Edit 2006, 45(8):1236-1241.
- [24]Jochens H, Bornscheuer UT: Natural diversity to guide focused directed evolution. ChemBioChem 2010, 11(13):1861-1866.
- [25]Dykxhoorn DM, StPierre R, Linn T: A set of compatible tac promoter expression vectors. Gene 1996, 177(1–2):133-136.