| BMC Biotechnology | |
| Active fungal GH115 α-glucuronidase produced in Arabidopsis thaliana affects only the UX1-reactive glucuronate decorations on native glucuronoxylans | |
| Sun-Li Chong3  Marta Derba-Maceluch1  Sanna Koutaniemi3  Leonardo D Gómez2  Simon J McQueen-Mason2  Maija Tenkanen3  Ewa J Mellerowicz1  | |
| [1] Umeå Plant Science Centre, Department of Forest Genetics and Plant Physiology, Swedish University of Agricultural Sciences, Umeå 901-83, Sweden | |
| [2] Center for Novel Agricultural Products Department of Biology, University of York, York YO10 5DD, UK | |
| [3] Department of Food and Environmental Sciences, Faculty of Agriculture and Forestry, University of Helsinki, Helsinki 00014, Finland | |
| 关键词: Secondary cell walls; Feedstocks for biofuels; Xylan degradation; Glucuronoxylan; 4-O-methylglucuronic acid; Alpha-glucuronidase; Xylan acetylation; | |
| Others : 1216689 DOI : 10.1186/s12896-015-0154-8 |
|
| received in 2014-11-18, accepted in 2015-04-27, 发布年份 2015 | |
PDF
|
|
【 摘 要 】
Background
Expressing microbial polysaccharide-modifying enzymes in plants is an attractive approach to custom tailor plant lignocellulose and to study the importance of wall structures to plant development. Expression of α-glucuronidases in plants to modify the structures of glucuronoxylans has not been yet attempted. Glycoside hydrolase (GH) family 115 α-glucuronidases cleave the internal α-D-(4-O-methyl)glucopyranosyluronic acid ((Me)GlcA) from xylans or xylooligosaccharides. In this work, a GH115 α-glucuronidase from Schizophyllum commune, ScAGU115, was expressed in Arabidopsis thaliana and targeted to apoplast. The transgene effects on native xylans’ structures, plant development, and lignocellulose saccharification were evaluated and compared to those of knocked out glucuronyltransferases AtGUX1 and AtGUX2.
Results
The ScAGU115 extracted from cell walls of Arabidopsis was active on the internally substituted aldopentaouronic acid (XUXX). The transgenic plants did not show any change in growth or in lignocellulose saccharification. The cell wall (Me)GlcA and other non-cellulosic sugars, as well as the lignin content, remained unchanged. In contrast, the gux1gux2 double mutant showed a 70% decrease in (Me)GlcA to xylose molar ratio, and, interestingly, a 60% increase in the xylose content. Whereas ScAGU115-expressing plants exhibited a decreased signal in native secondary walls from the monoclonal antibody UX1 that recognizes (Me)GlcA on non-acetylated xylan, the signal was not affected after wall deacetylation. In contrast, gux1gux2 mutant was lacking UX1 signals in both native and deacetylated cell walls. This indicates that acetyl substitution on the xylopyranosyl residue carrying (Me)GlcA or on the neighboring xylopyranosyl residues may restrict post-synthetic modification of xylans by ScAGU115 in planta.
Conclusions
Active GH115 α-glucuronidase has been produced for the first time in plants. The cell wall–targeted ScAGU115 was shown to affect those glucuronate substitutions of xylan, which are accessible to UX1 antibody and constitute a small fraction in Arabidopsis, whereas majority of (Me)GlcA substitutions were resistant, most likely due to the shielding by acetyl groups. Plants expressing ScAGU115 did not show any defects under laboratory conditions indicating that the UX1 epitope of xylan is not essential under these conditions. Moreover the removal of the UX1 xylan epitope does not affect lignocellulose saccharification.
【 授权许可】
2015 Chong et al.
【 预 览 】
| Files | Size | Format | View |
|---|---|---|---|
| 20150702012208364.pdf | 3368KB | ||
| Figure 7. | 67KB | Image | |
| Figure 6. | 21KB | Image | |
| Figure 5. | 82KB | Image | |
| Figure 4. | 43KB | Image | |
| Figure 3. | 24KB | Image | |
| Figure 2. | 51KB | Image | |
| Figure 1. | 43KB | Image |
【 图 表 】
Figure 1.
Figure 2.
Figure 3.
Figure 4.
Figure 5.
Figure 6.
Figure 7.
【 参考文献 】
- [1]Himmel ME, Ding S, Johnson DK, Adney WS, Nimlos MR, Brady JW et al.. Biomass recalcitrance: engineering plants and enzymes for biofuels production. Science. 2007; 315(5813):804-7.
- [2]Pauly M, Keegstra K. Cell-wall carbohydrates and their modification as a resource for biofuels. Plant J. 2008; 54(4):559-68.
- [3]Mellerowicz EJ, Gorshkova TA. Tensional stress generation in gelatinous fibres: a review and possible mechanism based on cell-wall structure and composition. J Exp Botany. 2011; 63:551-65.
- [4]Carpita NC, Gibeaut DM. Structural models of primary cell walls in flowering plants: consistency of molecular structure with the physical properties of the walls during growth. Plant J. 1993; 3(1):1-30.
- [5]Cosgrove DJ. Growth of the plant cell wall. Nat Rev Mol Cell Biol. 2005; 6(11):850-61.
- [6]Scheller HV, Ulvskov P. Hemicelluloses. Annu Rev Plant Biol. 2010; 61(1):263-89.
- [7]Ebringerová A, Heinze T. Xylan and xylan derivatives -- biopolymers with valuable properties, 1. Naturally occurring xylans structures, isolation procedures and properties. Macromol Rapid Commun. 2000; 21(9):542-56.
- [8]Cheng K, Sorek H, Zimmermann H, Wemmer DE, Pauly M. Solution-state 2D NMR spectroscopy of plant cell walls enabled by a dimethylsulfoxide-d6/1-ethyl-3-methylimidazolium acetate solvent. Anal Chem. 2013; 85(6):3213-21.
- [9]Chong SL, Virkki L, Maaheimo H, Juvonen M, Derba-Maceluch M, Koutaniemi S et al.. O-Acetylation of glucuronoxylan in Arabidopsis thaliana wild type and its change in xylan biosynthesis mutants. Glycobiology. 2014; 24(6):494-506.
- [10]Evtuguin D, Tomás J, Silva AS, Neto C. Characterization of an acetylated heteroxylan from Eucalyptus globulus Labill. Carbohydr Res. 2003; 338(7):597-604.
- [11]Naran R, Black S, Decker SR, Azadi P. Extraction and characterization of native heteroxylans from delignified corn stover and aspen. Cellulose. 2009; 16(4):661-75.
- [12]Teleman A, Tenkanen M, Jacobs A, Dahlman O. Characterization of O-acetyl-(4-O-methylglucurono)xylan isolated from birch and beech. Carbohydr Res. 2002; 337(4):373-7.
- [13]Yuan Y, Teng Q, Zhong R, Ye Z. The Arabidopsis DUF231 domain-containing protein ESK1 mediates 2-O- and 3-O-acetylation of xylosyl residues in xylan. Plant and Cell Physiol. 2013; 54(7):1186-99.
- [14]Shatalov AA, Evtuguin DV, Pascoal Neto C. (2-O-α-D-Galactopyranosyl-4-O-methyl-α-D-glucurono)-D-xylan from Eucalyptus globulus Labill. Carbohydr Res. 1999; 320(1-2):93-9.
- [15]Balakshin MY, Capanema EA, Chang H. MWL fraction with a high concentration of lignin-carbohydrate linkages: isolation and 2D NMR spectroscopic analysis. Holzforschung. 2007; 61(1):1-7.
- [16]Takahashi N, Koshijima T. Ester linkages between lignin and glucuronoxylan in a lignin-carbohydrate complex from beech (Fagus crenata) wood. Wood Sci Technol. 1988; 22(3):231-41.
- [17]Brown DM, Zhang Z, Stephens E, Dupree P, Turner SR. Characterization of IRX10 and IRX10-like reveals an essential role in glucuronoxylan biosynthesis in Arabidopsis. Plant J. 2009; 57(4):732-46.
- [18]Wu A, Rihouey C, Seveno M, Hoernblad E, Singh SK, Matsunaga T et al.. The Arabidopsis IRX10 and IRX10-LIKE glycosyltransferases are critical for glucuronoxylan biosynthesis during secondary cell wall formation. Plant J. 2009; 57(4):718-31.
- [19]Wu A, Hörnblad E, Voxeur A, Gerber L, Rihouey C, Lerouge P et al.. Analysis of the Arabidopsis IRX9/IRX9-L and IRX14/IRX14-L pairs of glycosyltransferase genes reveals critical contributions to biosynthesis of the hemicellulose glucuronoxylan. Plant Physiol. 2010; 153(2):542-54.
- [20]Lee C, Zhong R, Richardson EA, Himmelsbach DS, McPhail BT, Ye Z. The PARVUS gene is expressed in cells undergoing secondary wall thickening and is essential for glucuronoxylan biosynthesis. Plant Cell Physiol. 2007; 48(12):1659-72.
- [21]Peña MJ, Zhong R, Zhou G, Richardson EA, O'Neill MA, Darvill AG et al.. Arabidopsis irregular xylem8 and irregular xylem9: Implications for the complexity of glucuronoxylan biosynthesis. Plant Cell. 2007; 19(2):549-63.
- [22]Zhong R, Pena MJ, Zhou G, Nairn CJ, Wood-Jones A, Richardson EA et al.. Arabidopsis fragile fiber8, which encodes a putative glucuronyltransferase, is essential for normal secondary wall synthesis. Plant Cell. 2005; 17(12):3390-408.
- [23]Mortimer JC, Miles GP, Brown DM, Zhang Z, Segura MP, Weimar T et al.. Absence of branches from xylan in Arabidopsis gux mutants reveals potential for simplification of lignocellulosic biomass. Proc Natl Acad Sci U S A. 2010; 107(40):17409-14.
- [24]Lee C, Teng Q, Zhong R, Ye Z. Arabidopsis GUX proteins are glucuronyltransferases responsible for the addition of glucuronic acid side chains onto xylan. Plant Cell Physiol. 2012; 53(7):1204-16.
- [25]Lee C, Teng Q, Zhong R, Ye Z. The four Arabidopsis REDUCED WALL ACETYLATION genes are expressed in secondary wall-containing cells and required for the acetylation of xylan. Plant Cell Physiol. 2011; 52(8):1289-301.
- [26]Manabe Y, Verhertbruggen Y, Gille S, Harholt J, Chong S, Pawar PM et al.. RWA proteins play vital and distinct roles in cell wall O-acetylation in Arabidopsis thaliana. Plant Physiol. 2013; 163:1107-17.
- [27]Bae H, Kim HJ, Kim YS. Production of a recombinant xylanase in plants and its potential for pulp biobleaching applications. Bioresour Technol. 2008; 99(9):3513-9.
- [28]Borkhardt B, Harholt J, Ulvskov P, Ahring BK, Jørgensen B, Brinch-Pedersen H. Autohydrolysis of plant xylans by apoplastic expression of thermophilic bacterial endo-xylanases. Plant Biotechnol. 2010; 8(3):363-74.
- [29]Buanafina M, Langdon T, Dalton S, Morris P. Expression of a Trichoderma reesei β-1,4 endo-xylanase in tall fescue modifies cell wall structure and digestibility and elicits pathogen defence responses. Planta. 2012; 236(6):1757-74.
- [30]Herbers K, Wilke I, Sonnewald U. A thermostable xylanase from Clostridium thermocellum expressed at high levels in the apoplast of transgenic tobacco has no detrimental effects and is easily purified. Nat Biotech. 1995; 13(1):63-6.
- [31]Kimura T, Mizutani T, Tanaka T, Koyama T, Sakka K, Ohmiya K. Molecular breeding of transgenic rice expressing a xylanase domain of the xynA gene from Clostridium thermocellum. Appl Microbiol Biotechnol. 2003; 62(4):374-9.
- [32]Weng X, Huang Y, Hou C, Jiang D. Effects of an exogenous xylanase gene expression on the growth of transgenic rice and the expression level of endogenous xylanase inhibitor gene RIXI. J Sci Food Agric. 2013; 93(1):173-9.
- [33]Pogorelko G, Fursova O, Lin M, Pyle E, Jass J, Zabotina O. Post-synthetic modification of plant cell walls by expression of microbial hydrolases in the apoplast. Plant Mol Biol. 2011; 77(4-5):433-45.
- [34]Pogorelko G, Lionetti V, Fursova O, Sundaram RM, Qi M, Whitham SA et al.. Arabidopsis and Brachypodium distachyon transgenic plants expressing Aspergillus nidulans acetylesterases have decreased degree of polysaccharide acetylation and increased resistance to pathogens. Plant Physiol. 2013; 162(1):9-23.
- [35]Tsai AY, Canam T, Gorzsás A, Mellerowicz EJ, Campbell MM, Master ER. Constitutive expression of a fungal glucuronoyl esterase in Arabidopsis reveals altered cell wall composition and structure. Plant Biotechnol. 2012; 10(9):1077-87.
- [36]Latha Gandla M, Derba-Maceluch M, Liu X, Gerber L, Master ER, Mellerowicz EJ et al.. Expression of a fungal glucuronoyl esterase in Populus: Effects on wood properties and saccharification efficiency. Phytochemistry. 2015; 112:210-20.
- [37]de Vries RP, Poulsen CH, Madrid S, Visser J. aguA, the gene encoding an extracellular alpha-glucuronidase from Aspergillus tubingensis, is specifically induced on xylose and not on glucuronic acid. J Bacteriol. 1998; 180(2):243-9.
- [38]de Vries R, Battaglia E, Coutinho P, Henrissat B, Visser J. (Hemi-)cellulose degrading enzymes and their encoding genes from aspergillus and trichoderma. In: The Mycota: A comprehensive treatise on fungi as experimental systems for basic and applied research. 2nd ed. Hofrichter M, editor. Springer Berlin Heidelberg, Germany; 2011: p.341-55.
- [39]Siika-aho M, Tenkanen M, Buchert J, Puls J, Viikari L. An α-glucuronidase from Trichoderma reesei Rut C-30. Enzyme Microb Technol. 1994; 16(9):813-9.
- [40]Tenkanen M, Siika-aho M. An α-glucuronidase of Schizophyllum commune acting on polymeric xylan. J Biotechnol. 2000; 78(2):149-61.
- [41]Chong SL, Battaglia E, Coutinho P, Henrissat B, Tenkanen M, Vries R. The α-glucuronidase Agu1 from Schizophyllum commune is a member of a novel glycoside hydrolase family (GH115). Appl Microbiol Biotechnol. 2011; 90(4):1323-32.
- [42]Burgess-Brown NA, Sharma S, Sobott F, Loenarz C, Oppermann U, Gileadi O. Codon optimization can improve expression of human genes in Escherichia coli: A multi-gene study. Protein Expr Purif. 2008; 59(1):94-102.
- [43]Rudsander U, Denman S, Raza S, Teeril TT. Molecular features of family GH9 cellulases in hybrid Aspen and the filamentous fungus Phanerochaete chrysosporium. J Appl Glycosci. 2003; 50(2):253-6.
- [44]Takahashi J, Rudsander UJ, Hedenström M, Banasiak A, Harholt J, Amelot N et al.. KORRIGAN1 and its Aspen homolog PttCel9A1 decrease cellulose crystallinity in Arabidopsis stems. Plant Cell Physiol. 2009; 50(6):1099-115.
- [45]Campbell TN, Choy FYM. The effect of pH on green fluorescent protein: a brief review. Mol Biol Today. 2001; 2(1):1-4.
- [46]Zimmer M. Green Fluorescent Protein (GFP): Applications, structure, and related photophysical behavior. Chem Rev. 2002; 102(3):759-82.
- [47]Minic Z, Jouanin L. Plant glycoside hydrolases involved in cell wall polysaccharide degradation. Plant Physiol Bioch. 2006; 44(7–9):435-49.
- [48]Wolf S, Hématy K, Höfte H. Growth control and cell wall signaling in plants. Annu Rev Plant Biol. 2012; 63(1):381-407.
- [49]Zipfel C. Early molecular events in PAMP-triggered immunity. Curr Opin Plant Biol. 2009; 12(4):414-20.
- [50]Lange BM, Lapierre C, Sandermann H. Elicitor-induced spruce stress lignin (structural similarity to early developmental lignins). Plant Physiol. 1995; 108(3):1277-87.
- [51]Koutaniemi S, Guillon F, Tranquet O, Bouchet B, Tuomainen P, Virkki L et al.. Substituent-specific antibody against glucuronoxylan reveals close association of glucuronic acid and acetyl substituents and distinct labeling patterns in tree species. Planta. 2012; 236(2):739-51.
- [52]Guillon F, Tranquet O, Quillien L, Utille J, Ordaz Ortiz JJ, Saulnier L. Generation of polyclonal and monoclonal antibodies against arabinoxylans and their use for immunocytochemical location of arabinoxylans in cell walls of endosperm of wheat. J Cereal Sci. 2004; 40(2):167-82.
- [53]Harper AD, Bar-Peled M. Biosynthesis of UDP-Xylose. Cloning and characterization of a novel Arabidopsis gene family, UXS, encoding soluble and putative membrane-bound UDP-glucuronic acid decarboxylase isoforms. Plant Physiol. 2002; 130(4):2188-98.
- [54]Busse-Wicher M, Gomes TCF, Tryfona T, Nikolovski N, Stott K, Grantham NJ et al.. The pattern of xylan acetylation suggests xylan may interact with cellulose microfibrils as a two-fold helical screw in the secondary plant cell wall of Arabidopsis thaliana. Plant J. 2014; 79(3):492-506.
- [55]McKee LS, Peña MJ, Rogowski A, Jackson A, Lewis RJ, York WS et al.. Introducing endo-xylanase activity into an exo-acting arabinofuranosidase that targets side chains. Proc Natl Acad Sci U S A. 2012; 109(17):6537-42.
- [56]Kolenova K, Ryabova O, Vrsanska M, Biely P. Inverting character of family GH115 α-glucuronidases. FEBS Lett. 2010; 584(18):4063-8.
- [57]Rogowski A, Baslé A, Farinas CS, Solovyova A, Mortimer JC, Dupree P et al.. Evidence that GH115 α-glucuronidase activity, which is required to degrade plant biomass, is dependent on conformational flexibility. J Biol Chem. 2014; 289(1):53-64.
- [58]Karimi M, Inzé D, Depicker A. GATEWAY™ vectors for Agrobacterium-mediated plant transformation. Trends Plant Sci. 2002; 7(5):193-5.
- [59]Clough SJ, Bent AF. Floral dip: a simplified method forAgrobacterium-mediated transformation of Arabidopsis thaliana. Plant J. 1998; 16(6):735-43.
- [60]Franková L, Fry SC. Phylogenetic variation in glycosidases and glycanases acting on plant cell wall polysaccharides, and the detection of transglycosidase and trans-β-xylanase activities. Plant J. 2011; 67(4):662-81.
- [61]Sambrook JF, Russell DW. Molecular cloning: a laboratory manual. 3rd ed. New York: Cold Spring Harbor Laboratory Press; 2001.
- [62]Chong SL, Nissila T, Ketola RA, Koutaniemi S, Derba-Maceluch M, Mellerowicz EJ et al.. Feasibility of using atmospheric pressure matrix-assisted laser desorption/ionization with ion trap mass spectrometry in the analysis of acetylated xylooligosaccharides derived from hardwoods and Arabidopsis thaliana. Anal Bioanal Chem. 2011; 401(9):2995-3009.
- [63]Sundberg A, Sundberg K, Lillandt C, Holmbom B. Determination of hemicelluloses and pectins in wood and pulp fibers by acid methanolysis and gas chromatography. Nord Pulp Pap Res J. 1996; 11(4):216-9.
- [64]Chong SL, Koutaniemi S, Virkki L, Pynnönen H, Tuomainen P, Tenkanen M. Quantitation of 4-O-methylglucuronic acid from plant cell walls. Carbohydr Polym. 2013; 91(2):626-30.
- [65]Gerber L, Eliasson M, Trygg J, Moritz T, Sundberg B. Multivariate curve resolution provides a high-throughput data processing pipeline for pyrolysis-gas chromatography/mass spectrometry. J Anal Appl Pyrolysis. 2012; 95:95-100.
- [66]Gomez L, Whitehead C, Barakate A, Halpin C, McQueen-Mason S. Automated saccharification assay for determination of digestibility in plant materials. Biotechnol for Biofuels. 2010; 3(1):23. BioMed Central Full Text
PDF