Biotechnology for Biofuels | |
Construction of a self-cloning system in the unicellular green alga Pseudochoricystis ellipsoidea | |
Yuki Kasai2  Kohei Oshima2  Fukiko Ikeda2  Jun Abe2  Yuya Yoshimitsu1  Shigeaki Harayama2  | |
[1] Research Laboratories, Denso Corporation, Nisshin 470-0111, Aichi, Japan | |
[2] Department of Biological Sciences, Faculty of Science and Engineering, Chuo University, Kasuga 1-13-27, Bunkyo-ku, Tokyo 112-8551, Japan | |
关键词: Molecular breeding; Genetic transformation; Uracil auxotroph; Self-cloning; Microalgae; Green algae; Pseudochoricystis ellipsoidea; | |
Others : 1219147 DOI : 10.1186/s13068-015-0277-0 |
|
received in 2015-03-09, accepted in 2015-06-19, 发布年份 2015 | |
【 摘 要 】
Background
Microalgae have received considerable interest as a source of biofuel production. The unicellular green alga Pseudochoricystis ellipsoidea (non-validated scientific name) strain Obi appears to be suitable for large-scale cultivation in outdoor open ponds for biodiesel production because it accumulates lipids to more than 30 % of dry cell weight under nitrogen-depleted conditions. It also grows rapidly under acidic conditions at which most protozoan grazers of microalgae may not be tolerant. The lipid productivity of this alga could be improved using genetic engineering techniques; however, genetically modified organisms are the subject of regulation by specific laws. Therefore, the aim of this study was to develop a self-cloning-based positive selection system for the breeding of P. ellipsoidea.
Results
In this study, uracil auxotrophic mutants were isolated after the mutagenesis of P. ellipsoidea using either ultraviolet light or a transcription activator-like effector nuclease (TALEN) system. The cDNA of the uridine monophosphate synthase gene (PeUMPS) of P. ellipsoidea was cloned downstream of the promoter of either a beta-tubulin gene (PeTUBULIN1) or the gene for the small subunit of ribulose 1,5-bisphosphate carboxylase/oxygenase (PeRBCS) to construct the pUT1 or pUT2 plasmid, respectively. These constructs were introduced into uracil auxotroph strains, and genetically complementary transformants were isolated successfully on minimal agar plates. Use of Noble agar as the solidifying agent was essential to avoid the development of false-positive colonies. It took more than 6 weeks for the formation of colonies of pUT1 transformants, whereas pUT2 transformants formed colonies in 2 weeks. Real-time PCR revealed that there were more PeUMPS transcripts in pUT2 transformants than in pUT1 transformants. Uracil synthesis (Ura + ) transformants were also obtained using a gene cassette consisting solely of PeUMPS flanked by the PeRBCS promoter and terminator.
Conclusions
A self-cloning-based positive selection system for the genetic transformation of P. ellipsoidea was developed. Self-cloned P. ellipsoidea strains will require less-stringent containment measures for large-scale outdoor cultivation.
【 授权许可】
2015 Kasai et al.
【 预 览 】
Files | Size | Format | View |
---|---|---|---|
20150715081042784.pdf | 1340KB | download | |
Fig. 5. | 22KB | Image | download |
Fig. 4. | 42KB | Image | download |
Fig. 3. | 18KB | Image | download |
Fig. 2. | 38KB | Image | download |
Fig. 1. | 36KB | Image | download |
【 图 表 】
Fig. 1.
Fig. 2.
Fig. 3.
Fig. 4.
Fig. 5.
【 参考文献 】
- [1]Carlsson AS, van Beilen JB, Mӧller R, Clayton D. Micro- and macro-algae: utility for industrial applications, outputs from the EPOBIO project. In: Bowles D, editor. Newbury (UK): University of York, CPL Press September; 2007. p. 86.
- [2]Priyadarshani I, Rath B: Commercial and industrial applications of micro algae–a review. J Algal Biomass Utln 2012, 3:89-100.
- [3]Yaakob Z, Ali E, Zainal A, Mohamad M, Takriff MS: An overview: biomolecules from microalgae for animal feed and aquaculture. J Biol Res 2014, 21:6.
- [4]Chisti Y: Constraints to commercialization of algal fuels. J Biotechnol 2013, 167:201-14.
- [5]Chiaramonti D, Prussi M, Casini D, Tredici MR, Rodolfi L, Bassi N, et al.: Review of energy balance in raceway ponds for microalgae cultivation: re-thinking a traditional system is possible. Appl Energy 2013, 102:101-11.
- [6]Coons JE, Kalb DM, Dale T, Marrone BL: Getting to low-cost algal biofuels: a monograph on conventional and cutting-edge harvesting and extraction technologies. Algal Res 2014, 6:250-70.
- [7]Gimpel JA, Specht EA, Georgianna DR, Mayfield SP: Advances in microalgae engineering and synthetic biology applications for biofuel production. Curr Opin Chem Biol 2013, 17:489-95.
- [8]Blatti JL, Michaud J, Burkart MD: Engineering fatty acid biosynthesis in microalgae for sustainable biodiesel. Curr Opin Chem Biol 2013, 17:496-505.
- [9]Lusser M, Rodríguez-Cerezo E. Comparative regulatory approaches for new plant breeding techniques. -Workshop Proceedings. European Commission. JRC Technical Report EUR 252737 EN. 2012.
- [10]United States Department of Agriculture. Japan takes step forward to improve its GE product review process. USDA Japan reports. 2014. (usdajapan.org/en/reports/reports2014.html).
- [11]Holme IB, Wendt T, Holm PB: Intragenesis and cisgenesis as alternatives to transgenic crop development. Plant Biotechnol J 2013, 11:395-407.
- [12]Brennan L, Owende P: Biofuels from microalgae—a review of technologies for production, processing, and extractions of biofuels and co-products. Renew Sust Energ Rev 2010, 14:557-77.
- [13]Satoh A, Kato M, Yamato K, Ishibashi M, Sekiguchi H, Kurano N, et al.: Characterization of the lipid accumulation in a new microalgal species, Pseudochoricystis ellipsoidea (Trebouxiophyceae). J Jpn Inst Energ 2010, 89:909-13.
- [14]Ito T, Tanaka M, Shinkawa H, Nakada T, Ano Y, Kurano N, et al.: Metabolic and morphological changes of an oil accumulating trebouxiophycean alga in nitrogen-deficient conditions. Metabolomics 2013, 9:178-87.
- [15]Imamura S, Hagiwara D, Suzuki F, Kurano N, Harayama S: Genetic transformation of Pseudochoricystis ellipsoidea, an aliphatic hydrocarbon-producing green alga. J Gen Appl Microbiol 2012, 58:1-10.
- [16]Hino A: Safety assessment and public concerns for genetically modified food products: the Japanese experience. Toxicol Pathol 2002, 30:126-8.
- [17]Fischer S, Procopio S, Becker T: Self-cloning brewing yeast: a new dimension in beverage production. Eur Food Res Technol 2013, 237:851-63.
- [18]Traut TW, Jones ME: Uracil metabolism—UMP synthesis from orotic acid or uridine and conversion of uracil to beta-alanine: enzymes and cDNAs. Prog Nucleic Acid Res Mol Biol 1996, 53:1-78.
- [19]Christian M, Cermak T, Doyle EL, Schmidt C, Zhang F, Hummel A, et al.: Targeting DNA double-strand breaks with TAL effector nucleases. Genetics 2010, 186:757-61.
- [20]Miller JC, Tan S, Qiao G, Barlow KA, Wang J, Xia DF, et al.: A TALE nuclease architecture for efficient genome editing. Nat Biotechnol 2011, 29:143.
- [21]Wood AJ, Lo T-W, Zeitler B, Pickle CS, Ralston EJ, Lee AH, et al.: Targeted genome editing across species using ZFNs and TALENs. Science 2011, 333:307.
- [22]Sambrook J, Fritsch EF, Maniatis T: Molecular cloning: a laboratory manual. 2nd edition. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York; 1989.
- [23]Baba T, Ara T, Hasegawa M, Takai Y, Okumura Y, Baba M, et al.: Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection. Mol Syst Biol 2006, 2:1-11.
- [24]Imamura S, Kanesaki Y, Ohnuma M, Inouye T, Sekine Y, Fujiwara T, et al.: R2R3-type MYB transcription factor, CmMYB1, is a central nitrogen assimilation regulator in Cyanidisoschyzon merolae. Proc Natl Acad Sci U S A 2009, 106:12548-53.