期刊论文详细信息
Chemistry Central Journal
QSPR study on the octanol/air partition coefficient of polybrominated diphenyl ethers by using molecular distance-edge vector index
Long Jiao3  Mingming Gao2  Xiaofei Wang1  Hua Li3 
[1] College of Chemistry and Chemical Engineering, Xi’an Shiyou University, Xi’an 710065, People's Republic of China
[2] No.203 Research lnstitute of Nuclear industry, Xianyang 712000, People's Republic of China
[3] College of Chemistry and Materials Science, Northwest University, Xi’an 710069, People's Republic of China
关键词: Artificial neural network;    Molecular distance-edge vector index;    Octanol/air partition coefficient;    Polybrominated diphenyl ethers;    QSPR;   
Others  :  787775
DOI  :  10.1186/1752-153X-8-36
 received in 2014-03-05, accepted in 2014-06-04,  发布年份 2014
PDF
【 摘 要 】

Background

The quantitative structure property relationship (QSPR) for octanol/air partition coefficient (KOA) of polybrominated diphenyl ethers (PBDEs) was investigated. Molecular distance-edge vector (MDEV) index was used as the structural descriptor of PBDEs. The quantitative relationship between the MDEV index and the lgKOA of PBDEs was modeled by multivariate linear regression (MLR) and artificial neural network (ANN) respectively. Leave one out cross validation and external validation was carried out to assess the predictive ability of the developed models. The investigated 22 PBDEs were randomly split into two groups: Group I, which comprises 16 PBDEs, and Group II, which comprises 6 PBDEs.

Results

The MLR model and the ANN model for predicting the KOA of PBDEs were established. For the MLR model, the prediction root mean square relative error (RMSRE) of leave one out cross validation and external validation is 2.82 and 2.95, respectively. For the L-ANN model, the prediction RMSRE of leave one out cross validation and external validation is 2.55 and 2.69, respectively.

Conclusion

The developed MLR and ANN model are practicable and easy-to-use for predicting the KOA of PBDEs. The MDEV index of PBDEs is shown to be quantitatively related to the KOA of PBDEs. MLR and ANN are both practicable for modeling the quantitative relationship between the MDEV index and the KOA of PBDEs. The prediction accuracy of the ANN model is slightly higher than that of the MLR model. The obtained ANN model shoud be a more promising model for studying the octanol/air partition behavior of PBDEs.

【 授权许可】

   
2014 Jiao et al.; licensee Chemistry Central Ltd.

【 预 览 】
附件列表
Files Size Format View
20140702191733458.pdf 355KB PDF download
Figure 3. 16KB Image download
Figure 2. 24KB Image download
Figure 1. 23KB Image download
【 图 表 】

Figure 1.

Figure 2.

Figure 3.

【 参考文献 】
  • [1]Anderson HA, Imma P, Knobeloch L, Turyk M, Mathew J, Buelow C, Persky V: Polybrominated diphenyl ethers (PBDE) in serum: Findings from a US cohort of consumers of sport-caught fish. Chemosphere 2008, 73:187-194.
  • [2]EPA: America’s children and the environment. 2014. http://www.epa.gov/ace/pdfs/Biomonitoring-PBDEs.pdf webcite
  • [3]Secretariat of the Stockholm Convention: Listing of POPs in the Stockholm Convention. 2014. http://chm.pops.int/TheConvention/ThePOPs/ListingofPOPs/tabid/2509/Default.aspx webcite
  • [4]Yue CY, Li LY: Filling the gap: estimating physicochemical properties of the full array of polybrominated diphenyl ethers (PBDEs). Environ Pollut 2013, 180:312-323.
  • [5]Wang YW, Zhao CY, Ma WP, Liu HX, Wang T, Jiang GB: Quantitative structure-activity relationship for prediction of the toxicity of polybrominated diphenyl ether (PBDE) congeners. Chemosphere 2006, 64:515-524.
  • [6]Watkins DJ, McClean MD, Fraser AJ, Weinberg J, Stapleton HM, Webster TF: Associations between PBDEs in office air, dust, and surface wipes. Environ Int 2013, 59:124-132.
  • [7]Harner T, Shoeib M: Measurements of octanol-air partition coefficients (KOA) for polybrominated diphenyl ethers (PBDEs): predicting partitioning in the environment. J Chem Eng Data 2002, 47:228-232.
  • [8]Mizukawa K, Takada H, Takeuchi I, Ikemoto T, Omori K, Tsuchiya K: Bioconcentration and biomagnification of polybrominated diphenyl ethers (PBDEs) through lower-trophic-level coastal marine food web. Mar Pollut Bull 2009, 58:1217-1224.
  • [9]Wania F, Lei YD, Harner T: Estimating octanol-air partition coefficients of nonpolar semivolatile organic compounds from gas chromatographic retention times. Anal Chem 2002, 74:3476-3483.
  • [10]Han SY, Liang C, Qiao JQ, Lian HZ, Ge X, Chen HY: A novel evaluation method for extrapolated retention factor in determination of n-octanol/water partition coefficient of halogenated organic pollutants by reversed-phase high performance liquid chromatography. Anal Chim Acta 2012, 713:130-135.
  • [11]Cetin B, Odabasi M: Atmospheric concentrations and phase partitioning of polybrominated diphenyl ethers (PBDEs) in Izmir, Turkey. Chemosphere 2008, 71:1067-1078.
  • [12]Xu HY, Zou JW, Yu QS, Wang YH, Zhang JY, Jin HX: QSPR/QSAR models for prediction of the physicochemical properties and biological activity of polybrominated diphenyl ethers. Chemosphere 2007, 66:1998-2010.
  • [13]Wang ZY, Zeng XL, Zhai ZC: Prediction of supercooled liquid vapor pressures and n-octanol/air partition coefficients for polybrominated diphenyl ethers by means of molecular descriptors from DFT method. Sci Total Environ 2008, 389:296-305.
  • [14]Chen JW, Harner T, Yang P, Quan X, Chen S, Schramm KW, Kettrup A: Quantitative predictive models for octanol–air partition coefficients of polybrominated diphenyl ethers at different temperatures. Chemosphere 2003, 51:577-584.
  • [15]Papa E, Kovarich S, Gramatica P: Development, validation and inspection of the applicability domain of QSPR models for physicochemical properties of polybrominated diphenyl ethers. QSAR Comb Sci 2009, 28:790-796.
  • [16]Nandi S, Monesi A, Drgan V, Merzel F, Novič M: Quantitative structure-activation barrier relationship modeling for Diels-Alder ligations utilizing quantum chemical structural descriptors. Chem Cent J 2013, 7:171. BioMed Central Full Text
  • [17]Steffen A, Apostolakis J: On the ease of predicting the thermodynamic properties of beta-cyclodextrin inclusion complexes. Chem Cent J 2007, 1:29. BioMed Central Full Text
  • [18]Gutman I, Tosovic J: Testing the quality of molecular structure descriptors. Vertex–degree based topological indices. J Serb Chem Soc 2013, 78:805-810.
  • [19]Liu HH, Xiao X, Qin J, Liu YM: Study on structural characteristics and QSPR of polychlorinated biphenyls Isomers (PCBs). J Chongqing Inst Tech (In Chinese) 2005, 19:67-70.
  • [20]Liu SS, Liu HL, Xia ZN, Cao CZ, Li ZL: Molecular distance-edge vector (μ): an extension from alkanes to alcohols. J Chem Inf Comput Sci 1999, 39:951-957.
  • [21]Yin CS, Guo WM, Lin T, Liu SS, Fu RQ, Pan ZX, Wang LS: Application of wavelet neural network to the prediction of gas chromatographic retention indices of alkanes. J Chin Chem Soc 2001, 48:739-749.
  • [22]Statsoft: Model extremely complex functions neural networks. 2013. http://www.statsoft.com/textbook/neural-networks webcite
  • [23]Yin CS, Shen Y, Liu SS, Yin QS, Guo WM, Pan ZX: Simultaneous quantitative UV spectrophotometric determination of multicomponents of amino acids using linear neural network. Comput Chem 2001, 25:239-243.
  • [24]Zhang WJ, Zhong XQ, Liu GH: Recognizing spatial distribution patterns of grassland insects: neural network approaches. Stoch Environ Res Risk Assess 2008, 22:207-216.
  • [25]Zhang YX, Li H, Hou AX, Havel J: Artificial neural networks based on principal component analysis input selection for quantification in overlapped capillary electrophoresis peaks. Chemometr Intell Lab Syst 2006, 82:165-175.
  • [26]Jalali-Heravi M, Garkani-Nejad Z: Prediction of electrophoretic mobilities of alkyl- and alkenylpyridines in capillary electrophoresis using artificial neural networks. J Chromatogr A 2002, 971:207-215.
  • [27]Fatemi MH, Baher E: Quantitative structure-property relationship modelling of the degradability rate constant of alkenes by OH radicals in atmosphere. SAR QSAR Environ Res 2009, 20:77-90.
  • [28]Abdollahi Y, Zakaria A, Abbasiyannejad M, Masoumi HRF, Moghaddam MG, Matori KA, Jahangirian H, Keshavarzi A: Artificial neural network modeling of p-cresol photodegradation. Chem Cent J 2013, 7:96. BioMed Central Full Text
  • [29]Martens HA, Dardenne P: Validation and verification of regression in small data sets. Chemometr Intell Lab Syst 1998, 44:99-121.
  • [30]Yin CS, Shen Y, Liu SS, Yin QS, Guo WM, Pan ZX: Simultaneous quantitative UV spectrophotometric determination of multicomponents of amino acids using linear neural network. Compu Chem 2001, 25:239-243.
  文献评价指标  
  下载次数:34次 浏览次数:21次