Topological tangle modeling of difference topology experiments: tangle analysis of DNA-protein complexes

3rd International Conference on Science & Engineering in Mathematics, Chemistry and Physics 2015

数学;化学;物理学

Kim, Soojeong^1

Yonsei University, International Campus, 85 Songdogwahak-ro, Yeonsu-gu, Incheon

406-840, Korea, Republic of^1

关键词: DNA-protein complexes;   

Others  :  https://iopscience.iop.org/article/10.1088/1742-6596/622/1/012023/pdf
DOI  :  10.1088/1742-6596/622/1/012023

来源: IOP

【 摘 要 】

An n-string tangle is a three dimensional ball with nstrings which are properly embedded in it. Topological tangle analysis of DNA-protein complexes based on difference topology experiments are studied for last 30 years. In this paper, A 2-string tangle analysis of DNA-Tn3 complex [5, 6] and a 3-string tangle analysis of DNA-Mu complex [3, 13] and a biologically relevant 4-string tangle analysis [8, 10, 11] is reviewed. And a biologically relevant n-string tangle analysis is introduced.